Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | E1729_03430 | Not Available | Negative | 714065 - 714235 | 6333.34 |
| leucine efflux protein leue | E1729_03440 | Not Available | Positive | 714518 - 715156 | 23262.0 |
| duf1971 domain-containing protein | E1729_03445 | Not Available | Positive | 715329 - 715688 | 13612.2 |
| duf1869 domain-containing protein | E1729_03450 | Not Available | Positive | 715692 - 715874 | 6608.63 |
| glsb/yeaq/ymge family stress response membrane protein | E1729_03455 | Not Available | Positive | 716022 - 716270 | 8671.14 |
| protein yoaj | E1729_03460 | Not Available | Negative | 716329 - 716403 | 2691.57 |
| yoak family small membrane protein | E1729_03465 | Not Available | Negative | 716406 - 716504 | 3458.45 |
| diguanylate cyclase dgcp | E1729_03470 | Not Available | Negative | 716537 - 717562 | 38541.8 |
| duf333 domain-containing lipoprotein yoaf | E1729_03475 | Not Available | Positive | 717745 - 717999 | 8942.87 |
| duf488 domain-containing protein | E1729_03480 | Not Available | Negative | 718021 - 718368 | 13355.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





