Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa pyrophosphatase | E1729_03380 | Not Available | Negative | 704091 - 704669 | 21406.9 |
| aminodeoxychorismate synthase component 1 | E1729_03385 | Not Available | Negative | 704673 - 706034 | 50975.3 |
| yoah family protein | E1729_03390 | Not Available | Positive | 706108 - 706287 | 6554.7 |
| duf1889 family protein | E1729_03395 | Not Available | Negative | 706407 - 706766 | 13218.0 |
| rida family protein | E1729_03400 | Not Available | Negative | 707128 - 707472 | 12493.9 |
| atp-dependent dna helicase | E1729_03405 | Not Available | Positive | 707604 - 709514 | 70414.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | E1729_03410 | Not Available | Positive | 709572 - 710267 | 25163.2 |
| slp family lipoprotein yeay | E1729_03415 | Not Available | Positive | 710307 - 710888 | 20936.4 |
| long-chain-fatty-acid--coa ligase fadd | E1729_03420 | Not Available | Positive | 711093 - 712778 | 62335.7 |
| ribonuclease d | E1729_03425 | Not Available | Positive | 712860 - 713975 | 42184.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





