Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | E1729_03280 | Not Available | Positive | 684710 - 685207 | 18050.5 |
| rna chaperone proq | E1729_03285 | Not Available | Positive | 685304 - 686002 | 25853.9 |
| carboxy terminal-processing peptidase | E1729_03290 | Not Available | Positive | 686022 - 688070 | 76683.3 |
| protease htpx | E1729_03295 | Not Available | Positive | 688262 - 689143 | 31959.3 |
| mfs transporter | E1729_03300 | Not Available | Negative | 689189 - 690562 | 48107.7 |
| dna-binding transcriptional regulator kdgr | E1729_03305 | Not Available | Positive | 690739 - 691530 | 30046.2 |
| hypothetical protein | E1729_03310 | Not Available | Negative | 691674 - 691913 | 8514.67 |
| phop/phoq regulator mgrb | E1729_03315 | Not Available | Positive | 692072 - 692215 | 5524.03 |
| hypothetical protein | E1729_03320 | Not Available | Positive | 692290 - 692577 | 10793.1 |
| duf2627 domain-containing protein | E1729_03325 | Not Available | Positive | 693247 - 693390 | 5212.44 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





