Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase chez | E1729_03030 | Not Available | Positive | 633297 - 633941 | 23931.4 |
| flagellar type iii secretion system protein flhb | E1729_03035 | Not Available | Positive | 634130 - 635278 | 42236.3 |
| flagellar biosynthesis protein flha | E1729_03040 | Not Available | Positive | 635271 - 637349 | 74837.6 |
| flagellar protein flhe | E1729_03045 | Not Available | Positive | 637349 - 637741 | 14060.3 |
| arginine--trna ligase | E1729_03050 | Not Available | Negative | 637794 - 639527 | 64685.7 |
| voc family protein | E1729_03055 | Not Available | Positive | 639743 - 640309 | 21237.2 |
| copper homeostasis protein cutc | E1729_03060 | Not Available | Positive | 640323 - 641069 | 26672.2 |
| cytochrome c | E1729_03065 | Not Available | Positive | 641457 - 642557 | 40299.5 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | E1729_03070 | Not Available | Positive | 642582 - 645011 | 88958.9 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | E1729_03075 | Not Available | Negative | 645047 - 646018 | 37038.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





