Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1729_08955 | Not Available | Negative | 1844504 - 1844776 | 10112.2 |
| hypothetical protein | E1729_08960 | Not Available | Positive | 1844833 - 1845054 | 8152.95 |
| Host nuclease inhibitor protein | E1729_08965 | Not Available | Negative | 1845065 - 1845595 | 19758.7 |
| hypothetical protein | E1729_08970 | Not Available | Negative | 1845623 - 1845892 | 10124.3 |
| Putative transposase b subunit | E1729_08975 | Not Available | Negative | 1845895 - 1847061 | 42824.8 |
| Integrase core domain protein | E1729_08980 | Not Available | Negative | 1847072 - 1848841 | 64510.7 |
| hypothetical protein | E1729_08985 | Not Available | Negative | 1848857 - 1849174 | 11514.2 |
| Gp41 | E1729_08990 | Not Available | Negative | 1849174 - 1850094 | 34067.6 |
| Hypothetical protein | E1729_08995 | Not Available | Negative | 1850105 - 1850413 | 11011.3 |
| Hypothetical protein | E1729_09000 | Not Available | Negative | 1850466 - 1850654 | 7058.41 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





