Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar filament capping protein flid | E1729_02525 | Not Available | Negative | 555222 - 556637 | 48831.2 |
| flagellin flic | E1729_02530 | Not Available | Positive | 556885 - 557934 | 36292.2 |
| rna polymerase sigma factor flia | E1729_02535 | Not Available | Positive | 558098 - 558817 | 27549.8 |
| flagella biosynthesis regulatory protein fliz | E1729_02540 | Not Available | Positive | 558863 - 559414 | 21527.9 |
| cystine abc transporter substrate-binding protein | E1729_02545 | Not Available | Positive | 559502 - 560302 | 29040.8 |
| d-cysteine desulfhydrase | E1729_02550 | Not Available | Positive | 560407 - 561393 | 35188.5 |
| amino acid abc transporter permease | E1729_02555 | Not Available | Positive | 561408 - 562076 | 24802.7 |
| tyrosine transporter tyrp | E1729_02910 | Not Available | Negative | 611594 - 612805 | 42835.8 |
| duf2492 family protein | E1729_02915 | Not Available | Positive | 612996 - 613235 | 8644.22 |
| non-heme ferritin | E1729_02920 | Not Available | Negative | 613273 - 613770 | 19424.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





