Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | E1729_02475 | Not Available | Positive | 548479 - 549276 | 30707.4 |
| is200/is605 family transposase | E1729_02480 | Not Available | Negative | 549433 - 549957 | 20007.3 |
| transposase | E1729_02485 | Not Available | Positive | 549980 - 550309 | 12946.6 |
| hypothetical protein | E1729_02490 | Not Available | Negative | 550191 - 550688 | 18709.2 |
| putative sulfurtransferase yedf | E1729_02495 | Not Available | Negative | 550797 - 551030 | 8639.5 |
| selenium metabolism membrane protein yede/fdht | E1729_02500 | Not Available | Negative | 551027 - 552232 | 44431.5 |
| lipoprotein | E1729_02505 | Not Available | Positive | 552419 - 552832 | 15032.2 |
| alpha-amylase | E1729_02510 | Not Available | Negative | 552866 - 554353 | 56589.2 |
| flagella biosynthesis regulatory protein flit | E1729_02515 | Not Available | Negative | 554431 - 554796 | 13776.6 |
| flagellar export chaperone flis | E1729_02520 | Not Available | Negative | 554796 - 555206 | 15020.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





