Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | E1729_02325 | Not Available | Positive | 526290 - 526655 | 13825.0 |
| phosphohydrolase | E1729_02330 | Not Available | Positive | 526695 - 527390 | 25874.8 |
| dna cytosine methyltransferase | E1729_02335 | Not Available | Positive | 527457 - 528875 | 53467.8 |
| very short patch repair endonuclease | E1729_02340 | Not Available | Positive | 528856 - 529326 | 17986.6 |
| drug/metabolite exporter yeda | E1729_02345 | Not Available | Negative | 529315 - 530235 | 32196.0 |
| duf808 domain-containing protein | E1729_02350 | Not Available | Positive | 530408 - 531325 | 32134.7 |
| duf2158 domain-containing protein | E1729_02355 | Not Available | Positive | 531404 - 531586 | 6678.85 |
| cellulose biosynthesis regulator yedq | E1729_02360 | Not Available | Positive | 531757 - 533451 | 64236.5 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | E1729_02365 | Not Available | Negative | 533448 - 534263 | 30527.1 |
| peroxide/acid resistance protein yodd | E1729_02370 | Not Available | Negative | 534559 - 534786 | 8579.66 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





