Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-binding protein zint | E1729_02270 | Not Available | Negative | 516390 - 517040 | 24786.2 |
| is3-like element is1397 family transposase | E1729_02275 | Not Available | Positive | 517301 - 518649 | 51896.5 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | E1729_02280 | Not Available | Negative | 518733 - 519368 | 24040.6 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | E1729_02285 | Not Available | Negative | 519369 - 520373 | 37418.9 |
| hydroxyisourate hydrolase | E1729_02290 | Not Available | Negative | 520482 - 520895 | 15509.5 |
| dna-binding response regulator hprr | E1729_02295 | Not Available | Positive | 521028 - 521699 | 24982.2 |
| heavy metal sensor histidine kinase | E1729_02300 | Not Available | Positive | 521699 - 523057 | 50803.8 |
| protein deglycase hcha | E1729_02305 | Not Available | Negative | 523165 - 524016 | 31238.1 |
| hypothetical protein | E1729_02315 | Not Available | Negative | 524609 - 525724 | 41100.3 |
| hypothetical protein | E1729_02320 | Not Available | Negative | 525994 - 526197 | 8040.97 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





