Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster carrier protein apbc | E1729_02220 | Not Available | Positive | 505571 - 506680 | 39940.4 |
| duf2574 family protein | E1729_02225 | Not Available | Positive | 506943 - 507224 | 10178.1 |
| type 1 fimbrial protein | E1729_02230 | Not Available | Positive | 507517 - 508059 | 19059.6 |
| fimbrial assembly protein | E1729_02235 | Not Available | Positive | 508140 - 508814 | 24803.3 |
| fimbrial biogenesis outer membrane usher protein | E1729_02240 | Not Available | Positive | 508830 - 511310 | 92397.3 |
| putative fimbrial-like adhesin protein | E1729_02245 | Not Available | Positive | 511326 - 511930 | 21588.7 |
| phage tail protein | E1729_02250 | Not Available | Positive | 511931 - 514013 | 72921.3 |
| hypothetical protein | E1729_02255 | Not Available | Positive | 514013 - 514294 | 10686.5 |
| tail fiber domain-containing protein | E1729_02260 | Not Available | Positive | 514304 - 515008 | 26100.7 |
| hypothetical protein | E1729_02265 | Not Available | Positive | 515019 - 515306 | 10764.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





