Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | E1729_02115 | Not Available | Negative | 471683 - 473398 | 64696.0 |
| beta-glucosidase bglx | E1729_02120 | Not Available | Positive | 473594 - 475891 | 83548.8 |
| glycine betaine abc transporter substrate-binding protein osmf | E1729_02125 | Not Available | Positive | 476081 - 476998 | 32586.0 |
| glycine betaine abc transporter permease yehy | E1729_02130 | Not Available | Positive | 477005 - 478162 | 41193.2 |
| glycine betaine abc transporter atp binding protein yehx | E1729_02135 | Not Available | Positive | 478155 - 479081 | 34471.6 |
| glycine betaine abc transporter permease yehw | E1729_02140 | Not Available | Positive | 479086 - 479817 | 25564.2 |
| protein yoho | E1729_02145 | Not Available | Negative | 479798 - 479905 | 3642.85 |
| hth-type transcriptional regulator mlra | E1729_02150 | Not Available | Negative | 479965 - 480696 | 28079.8 |
| two-component regulatory system sensor histidine kinase btss | E1729_02155 | Not Available | Positive | 480918 - 482603 | 62096.3 |
| two-component system response regulator btsr | E1729_02160 | Not Available | Positive | 482600 - 483319 | 27401.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





