Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | E1729_01960 | Not Available | Positive | 439422 - 440672 | 43470.4 |
| transcriptional regulator yeil | E1729_01965 | Not Available | Negative | 440739 - 441437 | 26867.6 |
| ribosylpyrimidine nucleosidase | E1729_01970 | Not Available | Positive | 441567 - 442508 | 33777.1 |
| sugar kinase | E1729_01975 | Not Available | Negative | 442776 - 443864 | 40115.1 |
| deoxyribonuclease iv | E1729_01980 | Not Available | Negative | 443868 - 444725 | 31463.2 |
| yeih family protein | E1729_01985 | Not Available | Negative | 444799 - 445848 | 36914.4 |
| lysr family transcriptional regulator | E1729_01990 | Not Available | Positive | 445947 - 446828 | 32725.7 |
| lysine-specific permease | E1729_01995 | Not Available | Positive | 447033 - 448502 | 53536.9 |
| catecholate siderophore receptor cira | E1729_02005 | Not Available | Positive | 448794 - 450785 | 73984.6 |
| s-formylglutathione hydrolase | E1729_02010 | Not Available | Negative | 450817 - 451653 | 31260.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





