Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase ccmf/nrfe family subunit | E1729_01805 | Not Available | Positive | 404833 - 406776 | 71392.5 |
| thiol:disulfide interchange protein dsbe | E1729_01810 | Not Available | Positive | 406773 - 407330 | 20810.1 |
| cytochrome c-type biogenesis protein ccmh | E1729_01815 | Not Available | Positive | 407327 - 408379 | 39091.3 |
| nitrate/nitrite response regulator protein narp | E1729_01820 | Not Available | Negative | 408414 - 409061 | 23626.5 |
| Trna-pro | Not Available | Not Available | Positive | 410435 - 410511 | Not Available |
| cardiolipin transport protein pbga | E1729_01835 | Not Available | Negative | 410586 - 412346 | 67299.8 |
| duf1414 domain-containing protein | E1729_01840 | Not Available | Negative | 412366 - 412593 | 8302.98 |
| nucleoid-associated protein yejk | E1729_01845 | Not Available | Positive | 412775 - 413782 | 37825.6 |
| 50s ribosomal protein l25 | E1729_01850 | Not Available | Negative | 413921 - 414205 | 10693.1 |
| dead/deah box helicase | E1729_01855 | Not Available | Negative | 414330 - 416090 | 66462.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





