Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic nitrate reductase subunit alpha | E1729_01755 | Not Available | Positive | 396984 - 399470 | 93061.0 |
| ferredoxin-type protein napg | E1729_01760 | Not Available | Positive | 399477 - 400172 | 24926.1 |
| quinol dehydrogenase ferredoxin subunit naph | E1729_01765 | Not Available | Positive | 400159 - 401022 | 31889.4 |
| nitrate reductase cytochrome c-type subunit | E1729_01770 | Not Available | Positive | 401019 - 401468 | 16297.4 |
| cytochrome c-type protein napc | E1729_01775 | Not Available | Positive | 401478 - 402080 | 23101.8 |
| cytochrome c biogenesis heme-transporting atpase ccma | E1729_01780 | Not Available | Positive | 402099 - 402716 | 22866.4 |
| heme exporter protein ccmb | E1729_01785 | Not Available | Positive | 402713 - 403375 | 23620.3 |
| heme exporter protein ccmc | E1729_01790 | Not Available | Positive | 403417 - 404154 | 27852.9 |
| heme exporter protein ccmd | E1729_01795 | Not Available | Positive | 404151 - 404360 | 7745.59 |
| cytochrome c maturation protein ccme | E1729_01800 | Not Available | Positive | 404357 - 404836 | 17699.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





