Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase rcsd | E1729_01705 | Not Available | Negative | 384124 - 386796 | 100340.0 |
| porin ompc | E1729_01710 | Not Available | Positive | 387535 - 388656 | 41265.2 |
| fad:protein fmn transferase apbe | E1729_01715 | Not Available | Positive | 388768 - 389823 | 38561.0 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | E1729_01720 | Not Available | Positive | 389897 - 390961 | 39354.0 |
| dna oxidative demethylase alkb | E1729_01725 | Not Available | Positive | 390961 - 391611 | 24034.8 |
| microcin j25 efflux abc transporter yoji | E1729_01730 | Not Available | Positive | 391687 - 393330 | 61599.4 |
| malate dehydrogenase (quinone) | E1729_01735 | Not Available | Positive | 393548 - 395194 | 60247.1 |
| ecotin | E1729_01740 | Not Available | Negative | 395344 - 395832 | 18166.0 |
| ferredoxin-type protein napf | E1729_01745 | Not Available | Positive | 396240 - 396734 | 18078.4 |
| chaperone napd | E1729_01750 | Not Available | Positive | 396724 - 396987 | 9473.02 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





