Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2300 domain-containing protein | E1729_01655 | Not Available | Positive | 370487 - 372136 | 61502.3 |
| duf2135 domain-containing protein | E1729_01660 | Not Available | Positive | 372141 - 372917 | 28229.2 |
| acetyl-coa c-acetyltransferase | E1729_01665 | Not Available | Negative | 372991 - 374175 | 40351.0 |
| tigr00366 family protein | E1729_01670 | Not Available | Negative | 374206 - 375528 | 47548.7 |
| succinyl-coa--3-ketoacid-coa transferase | E1729_01675 | Not Available | Negative | 375525 - 376175 | 22975.1 |
| acetate coa-transferase subunit alpha | E1729_01680 | Not Available | Negative | 376175 - 376837 | 23536.8 |
| acetoacetate metabolism transcriptional regulator atoc | E1729_01685 | Not Available | Negative | 377033 - 378418 | 52137.5 |
| two-component system sensor histidine kinase atos | E1729_01690 | Not Available | Negative | 378415 - 380241 | 67860.2 |
| two-component system sensor histidine kinase rcsc | E1729_01695 | Not Available | Positive | 380408 - 383257 | 106597.0 |
| transcriptional regulator rcsb | E1729_01700 | Not Available | Negative | 383457 - 384107 | 23672.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





