Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnonate dehydratase | E1729_01555 | Not Available | Positive | 339139 - 340344 | 44206.9 |
| mfs transporter | E1729_01560 | Not Available | Positive | 340401 - 341690 | 46095.2 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | E1729_01565 | Not Available | Positive | 341708 - 342511 | 28903.6 |
| hypothetical protein | E1729_01570 | Not Available | Negative | 342552 - 342773 | 8220.74 |
| isncy family transposase | E1729_01575 | Not Available | Negative | 342786 - 343781 | 38396.0 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | E1729_01580 | Not Available | Negative | 343974 - 345164 | 44182.5 |
| glycerol-3-phosphate dehydrogenase subunit glpb | E1729_01585 | Not Available | Negative | 345161 - 346420 | 45382.9 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | E1729_01590 | Not Available | Negative | 346410 - 348038 | 58943.8 |
| glycerol-3-phosphate transporter | E1729_01595 | Not Available | Positive | 348311 - 349669 | 50312.3 |
| glycerophosphodiester phosphodiesterase | E1729_01600 | Not Available | Positive | 349674 - 350750 | 40886.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





