Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-phosphoerythronate dehydrogenase pdxb | E1729_01210 | Not Available | Positive | 267375 - 268511 | 41273.9 |
| aspartate-semialdehyde dehydrogenase | E1729_01215 | Not Available | Positive | 268577 - 269590 | 36338.1 |
| trna pseudouridine(38-40) synthase trua | E1729_01220 | Not Available | Positive | 269590 - 270402 | 30414.2 |
| deda family protein | E1729_01225 | Not Available | Positive | 270485 - 271144 | 24647.8 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | E1729_01230 | Not Available | Positive | 271300 - 272214 | 33323.9 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | E1729_01235 | Not Available | Positive | 272284 - 273552 | 45439.2 |
| cell division protein dedd | E1729_01240 | Not Available | Positive | 273542 - 274204 | 22971.8 |
| colicin v production protein | E1729_01245 | Not Available | Positive | 274645 - 275133 | 17991.0 |
| amidophosphoribosyltransferase | E1729_01250 | Not Available | Positive | 275170 - 276687 | 56533.4 |
| ubix family flavin prenyltransferase | E1729_01255 | Not Available | Positive | 276782 - 277351 | 20682.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





