Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | E1729_01160 | Not Available | Positive | 256786 - 257718 | 35045.7 |
| chorismate synthase | E1729_01165 | Not Available | Positive | 257753 - 258838 | 39167.9 |
| penicillin-insensitive murein endopeptidase | E1729_01170 | Not Available | Positive | 258842 - 259666 | 30241.6 |
| hypothetical protein | E1729_01175 | Not Available | Positive | 259666 - 260475 | 28631.2 |
| elongation factor p hydroxylase | E1729_01180 | Not Available | Positive | 260475 - 261023 | 21130.6 |
| yfcl family protein | E1729_01185 | Not Available | Positive | 261057 - 261335 | 10023.6 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | E1729_01190 | Not Available | Negative | 261456 - 263462 | 74383.2 |
| beta-ketoacyl-acp synthase i | E1729_01195 | Not Available | Positive | 263621 - 264841 | 42615.9 |
| arabinose transporter | E1729_01200 | Not Available | Positive | 265106 - 266284 | 40453.7 |
| flagella biosynthesis regulator flk | E1729_01205 | Not Available | Negative | 266281 - 267276 | 36640.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





