Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head decoration protein | E1729_02805 | Not Available | Positive | 596052 - 596381 | 11386.4 |
| Capsid component | E1729_02810 | Not Available | Positive | 596440 - 597474 | 38441.4 |
| Head assembly protein fi | E1729_02815 | Not Available | Positive | 597509 - 597928 | 14871.4 |
| hypothetical protein | E1729_02820 | Not Available | Positive | 597925 - 598305 | 14007.3 |
| Putative minor tail protein z | E1729_02825 | Not Available | Positive | 598337 - 599017 | 25613.2 |
| hypothetical protein | E1729_02830 | Not Available | Positive | 599014 - 599550 | 19433.8 |
| Phage baseplate assembly protein v | E1729_02835 | Not Available | Positive | 599531 - 600433 | 31887.0 |
| Baseplate assembly protein | E1729_02840 | Not Available | Positive | 600436 - 600777 | 12709.7 |
| Putative phage tail protein | E1729_02845 | Not Available | Positive | 600774 - 601694 | 33074.4 |
| Tail protein | E1729_02850 | Not Available | Positive | 601697 - 602323 | 23018.6 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





