Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid oxidation complex subunit alpha fadj | E1729_01110 | Not Available | Positive | 246217 - 248361 | 77187.0 |
| phosphohistidine phosphatase sixa | E1729_01115 | Not Available | Positive | 248564 - 249049 | 17242.9 |
| fimbrial protein | E1729_01120 | Not Available | Positive | 249608 - 250174 | 19878.4 |
| fimbrial biogenesis outer membrane usher protein | E1729_01125 | Not Available | Positive | 250255 - 252903 | 97303.2 |
| fimbrial protein stfd | E1729_01130 | Not Available | Positive | 252923 - 253675 | 27994.1 |
| hypothetical protein | E1729_01135 | Not Available | Positive | 253692 - 254183 | 17178.6 |
| fimbrial protein | E1729_01140 | Not Available | Positive | 254180 - 254659 | 17202.1 |
| fimbrial protein | E1729_01145 | Not Available | Positive | 254656 - 255183 | 18642.2 |
| duf2544 domain-containing protein | E1729_01150 | Not Available | Positive | 255185 - 256009 | 30269.8 |
| endonuclease smrb | E1729_01155 | Not Available | Negative | 256069 - 256620 | 21014.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





