Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 189260 - 189335 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 189375 - 189450 | Not Available |
| sensor domain-containing phosphodiesterase | E1729_00865 | Not Available | Positive | 189657 - 191846 | 83540.2 |
| nucleoside permease nupc | E1729_00870 | Not Available | Negative | 191896 - 193098 | 43478.4 |
| mn(2+) uptake nramp transporter mnth | E1729_00875 | Not Available | Positive | 193434 - 194672 | 44196.5 |
| duf2502 domain-containing protein | E1729_00880 | Not Available | Negative | 194813 - 195139 | 13263.4 |
| ion channel protein | E1729_00885 | Not Available | Negative | 195254 - 196510 | 43637.5 |
| glucokinase | E1729_00890 | Not Available | Positive | 196714 - 197679 | 34711.1 |
| fructose-like phosphotransferase enzyme iib component 1 | E1729_00895 | Not Available | Positive | 197898 - 198224 | 11736.0 |
| pts fructose transporter subunit iic | E1729_00900 | Not Available | Positive | 198246 - 199493 | 43981.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





