Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | E1729_26500 | Not Available | Negative | 5234291 - 5234585 | 11600.5 |
| sam-dependent methyltransferase | E1729_26505 | Not Available | Positive | 5234586 - 5234885 | 10987.1 |
| hypothetical protein | E1729_26510 | Not Available | Positive | 5234886 - 5235100 | 7892.55 |
| hypothetical protein | E1729_26515 | Not Available | Positive | 5235170 - 5235384 | 7991.7 |
| is200/is605 family transposase | E1729_26525 | Not Available | Positive | 5235735 - 5236008 | 10992.6 |
| Trna-ala | Not Available | Not Available | Positive | 5236032 - 5236107 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5236150 - 5236226 | Not Available |
| hypothetical protein | E1729_26540 | Not Available | Negative | 5236275 - 5236540 | 10592.4 |
| Trna-glu | Not Available | Not Available | Positive | 5236606 - 5236681 | Not Available |
| is3 family transposase | E1729_26555 | Not Available | Positive | 5237044 - 5237280 | 8474.22 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





