Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-adapter protein iram | E1729_26280 | Not Available | Positive | 5218806 - 5219141 | 12787.6 |
| duf3927 domain-containing protein | E1729_26285 | Not Available | Negative | 5219422 - 5219519 | 3227.16 |
| hypothetical protein | E1729_26290 | Not Available | Negative | 5219548 - 5219778 | 8327.36 |
| tetratricopeptide repeat protein | E1729_26295 | Not Available | Negative | 5219921 - 5220208 | 11362.7 |
| hypothetical protein | E1729_26300 | Not Available | Positive | 5220209 - 5220670 | 17282.9 |
| inovirus gp2 family protein | E1729_26305 | Not Available | Positive | 5220878 - 5221208 | 12337.6 |
| 9-o-acetyl-n-acetylneuraminic acid deacetylase | E1729_26310 | Not Available | Negative | 5221530 - 5222135 | 21192.2 |
| inovirus gp2 family protein | E1729_26315 | Not Available | Positive | 5222136 - 5222478 | 12736.1 |
| exonuclease | E1729_26320 | Not Available | Positive | 5222706 - 5223265 | 21219.4 |
| is66 family transposase | E1729_26325 | Not Available | Positive | 5223266 - 5223823 | 21139.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





