Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1729_26175 | Not Available | Positive | 5206640 - 5207019 | 13920.2 |
| glutamate decarboxylase | E1729_26180 | Not Available | Negative | 5207024 - 5208049 | 38479.2 |
| is66 family transposase | E1729_26185 | Not Available | Positive | 5208050 - 5208994 | 35249.0 |
| elongation factor tu | E1729_26190 | Not Available | Positive | 5209064 - 5209968 | 33592.1 |
| is3-like element is600 family transposase | E1729_26195 | Not Available | Positive | 5209969 - 5210857 | 34406.1 |
| ents/ybda mfs transporter | E1729_26200 | Not Available | Negative | 5210863 - 5211744 | 28527.6 |
| type vi secretion system tip protein vgrg | E1729_26205 | Not Available | Positive | 5211745 - 5212626 | 33288.9 |
| dna repair protein radc | E1729_26210 | Not Available | Negative | 5212627 - 5213065 | 16448.9 |
| antirestriction protein | E1729_26215 | Not Available | Negative | 5213081 - 5213500 | 16090.2 |
| is6-like element is26 family transposase | E1729_26220 | Not Available | Positive | 5213523 - 5214227 | 27896.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





