Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1482 family protein | E1729_25890 | Not Available | Negative | 5167510 - 5167701 | 6836.39 |
| cell division inhibition protein dicb | E1729_25895 | Not Available | Negative | 5167698 - 5167886 | 6959.68 |
| hypothetical protein | E1729_25900 | Not Available | Positive | 5168286 - 5168450 | 6147.52 |
| hypothetical protein | E1729_25905 | Not Available | Negative | 5168454 - 5168672 | 8424.03 |
| duf1391 domain-containing protein | E1729_25910 | Not Available | Negative | 5168832 - 5168987 | 5792.67 |
| hypothetical protein | E1729_25915 | Not Available | Negative | 5169253 - 5169672 | 16272.6 |
| cro/cl family transcriptional regulator | E1729_25920 | Not Available | Positive | 5169773 - 5170054 | 10632.8 |
| autotransporter adhesin ag43 | E1729_25925 | Not Available | Positive | 5170125 - 5172971 | 97278.1 |
| chemotaxis protein | E1729_25935 | Not Available | Positive | 5173357 - 5174262 | 33831.8 |
| patatin-like phospholipase family protein | E1729_25940 | Not Available | Positive | 5174259 - 5175329 | 38361.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





