Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3560 domain-containing protein | E1729_25775 | Not Available | Positive | 5149467 - 5150828 | 51807.3 |
| class i sam-dependent methyltransferase | E1729_25780 | Not Available | Positive | 5150875 - 5151438 | 21184.8 |
| is66 family transposase | E1729_25785 | Not Available | Positive | 5151685 - 5152476 | 29298.1 |
| esterase-like activity of phytase family protein | E1729_25790 | Not Available | Negative | 5152715 - 5154073 | 49070.4 |
| is1 family transposase | E1729_25800 | Not Available | Negative | 5154646 - 5154857 | 8421.35 |
| transcriptional regulator | E1729_25815 | Not Available | Negative | 5158064 - 5158279 | 8226.94 |
| helix-turn-helix domain-containing protein | E1729_25820 | Not Available | Positive | 5158329 - 5159045 | 26392.8 |
| duf1391 domain-containing protein | E1729_25825 | Not Available | Positive | 5159318 - 5159473 | 5705.6 |
| hypothetical protein | E1729_25830 | Not Available | Positive | 5159633 - 5159851 | 8409.01 |
| cell division inhibition protein dicb | E1729_25835 | Not Available | Positive | 5160417 - 5160605 | 7113.74 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





