Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family transcriptional regulator | E1729_25725 | Not Available | Positive | 5145151 - 5145411 | 9899.12 |
| hypothetical protein | E1729_25730 | Not Available | Positive | 5145506 - 5146108 | 23653.4 |
| hypothetical protein | E1729_25735 | Not Available | Negative | 5146014 - 5146211 | 7162.34 |
| hypothetical protein | E1729_25740 | Not Available | Positive | 5146280 - 5146477 | 7199.57 |
| hypothetical protein | E1729_25745 | Not Available | Negative | 5146963 - 5147178 | 7956.74 |
| hypothetical protein | E1729_25750 | Not Available | Positive | 5147514 - 5148227 | 28193.0 |
| gtpase family protein | E1729_25755 | Not Available | Positive | 5148249 - 5148371 | 4374.25 |
| hypothetical protein | E1729_25760 | Not Available | Positive | 5148570 - 5148761 | 6736.41 |
| single-stranded dna-binding protein | E1729_25765 | Not Available | Positive | 5148844 - 5148963 | 4331.39 |
| hypothetical protein | E1729_25770 | Not Available | Positive | 5149185 - 5149415 | 8582.57 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





