Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin family protein | E1729_02755 | Not Available | Positive | 588516 - 588899 | 13046.2 |
| Holin | E1729_02760 | Not Available | Positive | 588899 - 589171 | 10323.0 |
| Hypothetical protein | E1729_02765 | Not Available | Positive | 589171 - 589650 | 17423.8 |
| hypothetical protein | E1729_02770 | Not Available | Positive | 589658 - 589852 | 6476.84 |
| hypothetical protein | E1729_02775 | Not Available | Negative | 589912 - 590157 | 9419.21 |
| hypothetical protein | E1729_02780 | Not Available | Positive | 590526 - 591092 | 21879.8 |
| Dna packaging protein | E1729_02785 | Not Available | Positive | 591079 - 592941 | 69851.9 |
| Bacteriophage head-to-tail joining protein | E1729_02790 | Not Available | Positive | 592941 - 593174 | 8586.33 |
| Capsid component | E1729_02795 | Not Available | Positive | 593171 - 594745 | 58401.6 |
| Capsid component | E1729_02800 | Not Available | Positive | 594745 - 596052 | 45934.5 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





