Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | E1729_25620 | Not Available | Positive | 5131635 - 5131962 | 12262.6 |
| duf2345 domain-containing protein | E1729_25625 | Not Available | Positive | 5131970 - 5132926 | 34164.1 |
| duf4123 domain-containing protein | E1729_25630 | Not Available | Positive | 5132929 - 5133750 | 31616.6 |
| duf3304 domain-containing protein | E1729_25635 | Not Available | Positive | 5133794 - 5134321 | 19559.6 |
| hypothetical protein | E1729_25640 | Not Available | Positive | 5134318 - 5136186 | 70278.8 |
| type vi secretion system tip protein vgrg | E1729_25645 | Not Available | Positive | 5136292 - 5136619 | 12219.5 |
| elongation factor tu | E1729_25650 | Not Available | Negative | 5136620 - 5136754 | 4794.79 |
| Trna-thr | Not Available | Not Available | Positive | 5136869 - 5136944 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5136951 - 5137025 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5137142 - 5137226 | Not Available |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





