Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1364 domain-containing protein | E1729_25460 | Not Available | Negative | 5108975 - 5109265 | 10330.6 |
| hypothetical protein | E1729_25465 | Not Available | Negative | 5109258 - 5109428 | 6521.17 |
| dna base-flipping protein ybcn | E1729_25470 | Not Available | Negative | 5109428 - 5109883 | 17354.9 |
| hypothetical protein | E1729_25475 | Not Available | Negative | 5109880 - 5109981 | 3603.39 |
| alpha/beta hydrolase | E1729_25480 | Not Available | Positive | 5110331 - 5111374 | 37587.2 |
| adhesin | E1729_25485 | Not Available | Negative | 5111411 - 5111679 | 9920.43 |
| duf977 family protein | E1729_25490 | Not Available | Positive | 5111742 - 5112164 | 16195.5 |
| hypothetical protein | E1729_25495 | Not Available | Positive | 5112222 - 5112578 | 14175.0 |
| hypothetical protein | E1729_25500 | Not Available | Positive | 5112672 - 5112854 | 7017.83 |
| hypothetical protein | E1729_25510 | Not Available | Positive | 5113507 - 5113686 | 7039.07 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





