Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1729_25315 | Not Available | Negative | 5083032 - 5083436 | 14893.8 |
| hypothetical protein | E1729_25320 | Not Available | Negative | 5083516 - 5083938 | 15949.1 |
| paar domain-containing protein | E1729_25325 | Not Available | Negative | 5083931 - 5085349 | 52328.6 |
| type vi secretion system protein tssa | E1729_25330 | Not Available | Negative | 5085355 - 5086965 | 59974.0 |
| type vi secretion protein vask | E1729_25335 | Not Available | Negative | 5086958 - 5088723 | 66343.3 |
| is1 family transposase | E1729_25385 | Not Available | Positive | 5095173 - 5095384 | 8296.12 |
| glycoside hydrolase family 31 protein | E1729_25390 | Not Available | Negative | 5095982 - 5098363 | 92040.3 |
| mfs transporter | E1729_25395 | Not Available | Negative | 5098378 - 5099679 | 47785.2 |
| laci family transcriptional regulator | E1729_25400 | Not Available | Positive | 5099941 - 5101007 | 39924.7 |
| type vi secretion protein vask | E1729_25405 | Not Available | Negative | 5101008 - 5102577 | 57782.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





