Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein vasl | E1729_25060 | Not Available | Negative | 5037061 - 5038437 | 51935.5 |
| type vi secretion system baseplate subunit tsse | E1729_25065 | Not Available | Negative | 5038437 - 5038865 | 16345.9 |
| type vi secretion system lipoprotein tssj | E1729_25070 | Not Available | Negative | 5038869 - 5039405 | 20531.0 |
| type vi secretion system baseplate subunit tssg | E1729_25075 | Not Available | Negative | 5039386 - 5040465 | 39436.7 |
| type vi secretion system baseplate subunit tssf | E1729_25080 | Not Available | Negative | 5040429 - 5040757 | 12424.0 |
| host-nuclease inhibitor protein gam | E1729_25085 | Not Available | Negative | 5040758 - 5040964 | 8099.42 |
| cell division inhibitor protein | E1729_25095 | Not Available | Negative | 5041040 - 5041246 | 7717.32 |
| helix-turn-helix transcriptional regulator | E1729_25100 | Not Available | Negative | 5041842 - 5042531 | 25493.6 |
| helix-turn-helix domain-containing protein | E1729_25105 | Not Available | Positive | 5042636 - 5042866 | 8150.94 |
| regulator | E1729_25110 | Not Available | Positive | 5042936 - 5043475 | 20159.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





