Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe3+ dicitrate abc transporter permease | E1729_25010 | Not Available | Negative | 5026232 - 5027230 | 34894.9 |
| fe(3+)-dicitrate abc transporter substrate-binding protein fecb | E1729_25015 | Not Available | Negative | 5027227 - 5028129 | 33108.1 |
| fe(3+) dicitrate transport protein feca | E1729_25020 | Not Available | Negative | 5028174 - 5030498 | 85312.3 |
| fec operon regulator fecr | E1729_25025 | Not Available | Negative | 5030585 - 5031538 | 35548.1 |
| sigma-70 family rna polymerase sigma factor | E1729_25030 | Not Available | Negative | 5031535 - 5032056 | 19481.5 |
| transcriptional antiterminator | E1729_25035 | Not Available | Positive | 5032293 - 5032356 | 2470.11 |
| pts glucose transporter subunit iibc | E1729_25040 | Not Available | Positive | 5032388 - 5033968 | 57668.2 |
| putative c-s lyase | E1729_25045 | Not Available | Positive | 5033968 - 5035143 | 44895.6 |
| sis domain-containing protein | E1729_25050 | Not Available | Positive | 5035146 - 5035742 | 20884.3 |
| phosphoglycerate dehydrogenase | E1729_25055 | Not Available | Positive | 5035814 - 5036761 | 34341.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





