Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | E1729_24435 | Not Available | Positive | 4944610 - 4946643 | 76302.9 |
| hypothetical protein | E1729_24440 | Not Available | Positive | 4946883 - 4947104 | 8242.59 |
| hypothetical protein | E1729_24445 | Not Available | Positive | 4947141 - 4947326 | 7083.52 |
| hypothetical protein | E1729_24450 | Not Available | Positive | 4949598 - 4949927 | 13060.3 |
| hypothetical protein | E1729_24455 | Not Available | Positive | 4950081 - 4950392 | 11915.7 |
| hypothetical protein | E1729_24460 | Not Available | Positive | 4950519 - 4950914 | 14449.0 |
| hypothetical protein | E1729_24465 | Not Available | Positive | 4950996 - 4951406 | 16200.2 |
| hypothetical protein | E1729_24470 | Not Available | Positive | 4951757 - 4952239 | 18052.6 |
| hypothetical protein | E1729_24480 | Not Available | Negative | 4952846 - 4953076 | 8615.54 |
| hypothetical protein | E1729_24485 | Not Available | Negative | 4953098 - 4953301 | 8045.72 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





