Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1116 domain-containing protein | E1729_23620 | Not Available | Positive | 4803520 - 4804779 | 44980.7 |
| duf2877 domain-containing protein | E1729_23625 | Not Available | Positive | 4804790 - 4805605 | 29667.9 |
| carbamate kinase | E1729_23630 | Not Available | Positive | 4805602 - 4806495 | 31673.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | E1729_23635 | Not Available | Negative | 4807029 - 4808096 | 39439.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | E1729_23640 | Not Available | Negative | 4808093 - 4808602 | 17781.3 |
| hypothetical protein | E1729_23645 | Not Available | Negative | 4808698 - 4809027 | 12241.1 |
| udp-2,3-diacylglucosamine diphosphatase | E1729_23650 | Not Available | Negative | 4809138 - 4809860 | 26876.6 |
| peptidylprolyl isomerase b | E1729_23655 | Not Available | Negative | 4809863 - 4810357 | 18154.5 |
| cysteine--trna ligase | E1729_23660 | Not Available | Positive | 4810531 - 4811916 | 52186.0 |
| metal-dependent hydrolase | E1729_23665 | Not Available | Negative | 4811952 - 4812473 | 19598.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





