Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1729_00370 | Not Available | Positive | 84111 - 84326 | 7791.46 |
| intimin-like inverse autotransporter sinh | E1729_00375 | Not Available | Positive | 84532 - 86706 | 80961.1 |
| hypothetical protein | E1729_00380 | Not Available | Positive | 86762 - 87754 | 34668.9 |
| rata-like protein | E1729_00385 | Not Available | Positive | 87864 - 95945 | 285316.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 96474 - 96657 | Not Available |
| exodeoxyribonuclease vii large subunit | E1729_00390 | Not Available | Negative | 95999 - 97366 | 51291.7 |
| imp dehydrogenase | E1729_00395 | Not Available | Positive | 97528 - 98994 | 51998.6 |
| glutamine-hydrolyzing gmp synthase | E1729_00400 | Not Available | Positive | 99063 - 100640 | 58668.5 |
| hypothetical protein | E1729_00405 | Not Available | Negative | 100733 - 101272 | 20273.5 |
| glycine zipper 2tm domain-containing protein | E1729_00410 | Not Available | Negative | 101288 - 101803 | 17558.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





