Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iscs subfamily cysteine desulfurase | E1729_00270 | Not Available | Positive | 58851 - 60065 | 45092.2 |
| fe-s cluster assembly scaffold iscu | E1729_00275 | Not Available | Positive | 60093 - 60479 | 13849.3 |
| iron-sulfur cluster assembly protein isca | E1729_00280 | Not Available | Positive | 60496 - 60819 | 11556.7 |
| co-chaperone hscb | E1729_00285 | Not Available | Positive | 60915 - 61430 | 20138.8 |
| fe-s protein assembly chaperone hsca | E1729_00290 | Not Available | Positive | 61447 - 63297 | 65656.3 |
| isc system 2fe-2s type ferredoxin | E1729_00295 | Not Available | Positive | 63299 - 63634 | 12359.5 |
| fe-s cluster assembly protein iscx | E1729_00300 | Not Available | Positive | 63646 - 63846 | 7687.91 |
| aminopeptidase pepb | E1729_00305 | Not Available | Positive | 63905 - 65188 | 46254.8 |
| enhanced serine sensitivity protein sseb | E1729_00310 | Not Available | Positive | 65330 - 66106 | 28628.1 |
| 3-mercaptopyruvate sulfurtransferase | E1729_00315 | Not Available | Negative | 66599 - 67444 | 30828.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





