Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component system sensor histidine kinase qsee/glrk | E1729_00170 | Not Available | Positive | 34732 - 36159 | 53324.6 |
| two-component system qseef-associated lipoprotein qseg | E1729_00175 | Not Available | Positive | 36324 - 37037 | 27341.3 |
| two-component system response regulator glrr | E1729_00180 | Not Available | Positive | 37027 - 38361 | 49129.2 |
| nitrogen regulatory protein p-ii | E1729_00185 | Not Available | Positive | 38422 - 38760 | 12426.2 |
| no-inducible flavohemoprotein | E1729_00190 | Not Available | Negative | 38805 - 39995 | 43826.0 |
| serine hydroxymethyltransferase | E1729_00195 | Not Available | Positive | 40324 - 41577 | 45319.2 |
| rok family protein | E1729_00200 | Not Available | Negative | 41641 - 42834 | 44537.3 |
| duf5107 domain-containing protein | E1729_00205 | Not Available | Positive | 42952 - 46233 | 123706.0 |
| sugar abc transporter substrate-binding protein | E1729_00210 | Not Available | Positive | 46330 - 47313 | 35133.3 |
| sugar abc transporter atp-binding protein | E1729_00215 | Not Available | Positive | 47336 - 48865 | 55817.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





