Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | E1729_00120 | Not Available | Positive | 23343 - 24071 | 27392.2 |
| pyridoxine 5'-phosphate synthase | E1729_00125 | Not Available | Positive | 24083 - 24814 | 26376.9 |
| holo-acp synthase | E1729_00130 | Not Available | Positive | 24814 - 25194 | 14153.2 |
| small toxic protein shob | E1729_00135 | Not Available | Positive | 25615 - 25695 | 3103.22 |
| 4fe-4s dicluster ferredoxin yfhl | E1729_00140 | Not Available | Negative | 25889 - 26149 | 9862.88 |
| murr/rpir family transcriptional regulator | E1729_00145 | Not Available | Negative | 26205 - 27053 | 30679.3 |
| phosphatidylglycerophosphatase c | E1729_00150 | Not Available | Positive | 27262 - 27897 | 24437.8 |
| trna adenosine(34) deaminase tada | E1729_00155 | Not Available | Positive | 27922 - 28458 | 20071.4 |
| membrane-bound lytic murein transglycosylase mltf | E1729_00160 | Not Available | Negative | 28455 - 30011 | 58291.2 |
| phosphoribosylformylglycinamidine synthase | E1729_00165 | Not Available | Positive | 30269 - 34156 | 141382.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





