Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | E1729_00070 | Not Available | Negative | 13770 - 15392 | 60195.7 |
| rpoe leader peptide rsed | E1729_00075 | Not Available | Positive | 15648 - 15803 | 6229.83 |
| rna polymerase sigma factor rpoe | E1729_00080 | Not Available | Positive | 15800 - 16375 | 21697.0 |
| anti-sigma-e factor rsea | E1729_00085 | Not Available | Positive | 16408 - 17058 | 24322.8 |
| sigma-e factor regulatory protein rseb | E1729_00090 | Not Available | Positive | 17058 - 18014 | 35777.9 |
| soxr-reducing system protein rsec | E1729_00095 | Not Available | Positive | 18011 - 18490 | 16641.3 |
| elongation factor 4 | E1729_00100 | Not Available | Positive | 18688 - 20487 | 66602.2 |
| signal peptidase i | E1729_00105 | Not Available | Positive | 20503 - 21477 | 35947.4 |
| ribonuclease iii | E1729_00110 | Not Available | Positive | 21749 - 22429 | 25551.6 |
| gtpase era | E1729_00115 | Not Available | Positive | 22426 - 23331 | 33798.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





