Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tape measure protein | E1729_23835 | Not Available | Negative | 4844347 - 4847589 | 115673.0 |
| Phage tail protein | E1729_23840 | Not Available | Negative | 4847637 - 4847846 | 7604.94 |
| Putative tail assembly protein | E1729_23845 | Not Available | Negative | 4847942 - 4848316 | 14006.7 |
| Putative tail protein | E1729_23850 | Not Available | Negative | 4848331 - 4849047 | 25411.9 |
| Putative minor tail protein | E1729_23855 | Not Available | Negative | 4849114 - 4849458 | 12414.8 |
| Putative structural component | E1729_23860 | Not Available | Negative | 4849455 - 4849901 | 16656.9 |
| Bacteriophage head-tail adaptor | E1729_23865 | Not Available | Negative | 4849898 - 4850248 | 12663.4 |
| Hypothetical protein | E1729_23870 | Not Available | Negative | 4850258 - 4850584 | 12155.9 |
| Putative portal protein | E1729_23875 | Not Available | Negative | 4850581 - 4853166 | 95099.3 |
| Hypothetical protein | E1729_23880 | Not Available | Negative | 4853112 - 4853333 | 8201.73 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





