Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative cii repressor | E1729_02655 | Not Available | Positive | 574787 - 575263 | 17768.1 |
| Hypothetical protein | E1729_02660 | Not Available | Positive | 575303 - 575527 | 8471.11 |
| Putative replication protein | E1729_02665 | Not Available | Positive | 575524 - 576279 | 29445.0 |
| Putative helicase | E1729_02670 | Not Available | Positive | 576269 - 577684 | 52441.1 |
| Hypothetical protein | E1729_02675 | Not Available | Positive | 577723 - 578133 | 14769.8 |
| Hypothetical protein | E1729_02680 | Not Available | Positive | 578135 - 578371 | 9413.3 |
| Hypothetical protein | E1729_02685 | Not Available | Positive | 578368 - 578679 | 12000.8 |
| Hypothetical protein | E1729_02690 | Not Available | Positive | 578676 - 578900 | 8488.15 |
| hypothetical protein | E1729_02695 | Not Available | Positive | 579088 - 579309 | 8703.52 |
| Conserved hypothetical bacteriophage protein | E1729_02700 | Not Available | Positive | 579582 - 580370 | 29972.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





