Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative phosphoribosyl-atp pyrophosphohydrolase-like domain-containing protein | E1729_21995 | Not Available | Positive | 4479874 - 4480743 | 32722.6 |
| Putative thymidylate synthase | E1729_22000 | Not Available | Positive | 4480888 - 4482018 | 42799.4 |
| Hypothetical protein | E1729_22005 | Not Available | Positive | 4482020 - 4482433 | 15344.4 |
| Putative dihydrofolate reductase | E1729_22010 | Not Available | Positive | 4482430 - 4482906 | 17950.8 |
| Hypothetical protein | E1729_22015 | Not Available | Positive | 4482906 - 4483550 | 24044.2 |
| Hypothetical protein | E1729_22020 | Not Available | Positive | 4483612 - 4484031 | 15344.7 |
| Putative exonuclease | E1729_22025 | Not Available | Positive | 4484041 - 4484598 | 20817.0 |
| Hypothetical protein | E1729_22030 | Not Available | Positive | 4484757 - 4485566 | 29383.3 |
| Attr | Not Available | Not Available | Positive | 4485720 - 4485733 | Not Available |
| Putative n-6-adenine-methyltransferase | E1729_22035 | Not Available | Positive | 4485750 - 4486343 | 21996.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





