Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative cre-associated protein | E1729_21945 | Not Available | Positive | 4468508 - 4468720 | 8173.97 |
| Putative replication protein repa | E1729_21950 | Not Available | Negative | 4469300 - 4470394 | 41479.1 |
| Hypothetical protein | E1729_21955 | Not Available | Positive | 4470716 - 4471360 | 24580.0 |
| Putative exonuclease subunit 1 | E1729_21960 | Not Available | Positive | 4471615 - 4472700 | 39534.9 |
| Hypothetical protein | E1729_21965 | Not Available | Positive | 4472742 - 4472933 | 7306.11 |
| Putative exonuclease subunit 2 | E1729_21970 | Not Available | Positive | 4472930 - 4474846 | 70906.5 |
| Hypothetical protein | E1729_21975 | Not Available | Positive | 4474836 - 4475579 | 27177.7 |
| Putative ribonuclease h-like domain-containing protein | E1729_21980 | Not Available | Positive | 4475589 - 4476158 | 20929.3 |
| Putative ribonucleotide-diphosphate reductase, alpha subunit | E1729_21985 | Not Available | Positive | 4476232 - 4478547 | 86378.9 |
| Putative ribonucleotide-diphosphate reductase, beta subunit | E1729_21990 | Not Available | Positive | 4478654 - 4479796 | 44328.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





