Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | E1729_21895 | Not Available | Positive | 4462607 - 4463635 | 37180.7 |
| Dna polymerase i | E1729_21900 | Not Available | Positive | 4463696 - 4464640 | 35551.6 |
| Hypothetical protein | E1729_21905 | Not Available | Positive | 4464640 - 4464906 | 9454.57 |
| Putative reca-like recombinase | E1729_21910 | Not Available | Positive | 4464909 - 4465982 | 39031.6 |
| Hypothetical protein | E1729_21915 | Not Available | Positive | 4466075 - 4466275 | 6832.92 |
| Putative spfh domain / band 7 protein | E1729_21920 | Not Available | Positive | 4466279 - 4467109 | 30557.7 |
| Hypothetical protein | E1729_21925 | Not Available | Positive | 4467210 - 4467626 | 16084.8 |
| Hypothetical protein | E1729_21930 | Not Available | Positive | 4467682 - 4467957 | 10469.2 |
| Hypothetical protein | E1729_21935 | Not Available | Positive | 4467997 - 4468176 | 6539.34 |
| Hypothetical protein | E1729_21940 | Not Available | Positive | 4468173 - 4468508 | 12218.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





