Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative phage tail protein | E1729_21700 | Not Available | Positive | 4426533 - 4431260 | 171291.0 |
| Attl | Not Available | Not Available | Positive | 4431296 - 4431309 | Not Available |
| Hypothetical protein | E1729_21705 | Not Available | Negative | 4431896 - 4432189 | 9631.08 |
| hypothetical | E1729_21710 | Not Available | Positive | 4432120 - 4432644 | 21846.3 |
| Putative phage tail fiber protein | E1729_21715 | Not Available | Positive | 4433436 - 4435505 | 72074.7 |
| Hypothetical protein | E1729_21720 | Not Available | Positive | 4435566 - 4435820 | 9190.74 |
| Hypothetical protein | E1729_21725 | Not Available | Positive | 4435820 - 4436428 | 22090.2 |
| Putative phage superinfection exclusion protein cor-like protein | E1729_21730 | Not Available | Positive | 4436439 - 4436669 | 8302.23 |
| Putative holin | E1729_21735 | Not Available | Positive | 4436751 - 4437074 | 11567.0 |
| Putative endolysin | E1729_21740 | Not Available | Positive | 4437088 - 4437780 | 25097.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





