Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | E1729_15155 | Not Available | Negative | 3080749 - 3081144 | 14675.9 |
| Tail component | E1729_15160 | Not Available | Negative | 3081141 - 3081719 | 21676.1 |
| Head-tail joining protein | E1729_15165 | Not Available | Negative | 3081731 - 3082084 | 12825.9 |
| Dna packaging protein | E1729_15170 | Not Available | Negative | 3082096 - 3082494 | 14282.8 |
| Capsid component | E1729_15175 | Not Available | Negative | 3082536 - 3083561 | 38175.4 |
| Head-dna stabilization protein | E1729_15180 | Not Available | Negative | 3083617 - 3083949 | 11557.5 |
| Capsid component | E1729_15185 | Not Available | Negative | 3083959 - 3085278 | 45923.5 |
| Capsid component | E1729_15190 | Not Available | Negative | 3085259 - 3086860 | 59366.8 |
| Head-tail joining protein | E1729_15195 | Not Available | Negative | 3086857 - 3087063 | 7613.19 |
| Dna packaging protein | E1729_15200 | Not Available | Negative | 3087060 - 3088985 | 73240.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





