Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase endonuclease subunit | E1729_09390 | Not Available | Positive | 1913224 - 1914024 | 28956.6 |
| Head completion/stabilization protein | E1729_09395 | Not Available | Positive | 1914126 - 1914620 | 18345.5 |
| Attr | Not Available | Not Available | Positive | 1914523 - 1914535 | Not Available |
| Tail protein x | E1729_09400 | Not Available | Positive | 1914620 - 1914820 | 7479.97 |
| Holin family protein | E1729_09405 | Not Available | Positive | 1914823 - 1915146 | 11447.0 |
| M15 family metallopeptidase | E1729_09410 | Not Available | Positive | 1915143 - 1915535 | 14703.4 |
| Duf2570 domain-containing protein | E1729_09415 | Not Available | Positive | 1915532 - 1915927 | 14535.1 |
| Hypothetical protein | E1729_09420 | Not Available | Positive | 1916066 - 1917256 | 43526.2 |
| Hypothetical protein | E1729_15095 | Not Available | Negative | 3068079 - 3068372 | 10871.4 |
| Hypothetical protein | E1729_15100 | Not Available | Negative | 3068385 - 3068663 | 10749.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





