Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Replication protein | E1729_09340 | Not Available | Positive | 1901411 - 1904233 | 106871.0 |
| Recombinase | E1729_09345 | Not Available | Positive | 1904310 - 1905269 | 35024.9 |
| Plasmid partitioning/stability family protein | E1729_09350 | Not Available | Positive | 1905274 - 1905588 | 11939.2 |
| hypothetical protein | E1729_09355 | Not Available | Negative | 1905672 - 1906514 | 32951.1 |
| duf4760 domain-containing protein | E1729_09360 | Not Available | Negative | 1906554 - 1907051 | 19385.5 |
| hypothetical protein | E1729_09365 | Not Available | Positive | 1907775 - 1908299 | 19778.4 |
| Pbsx family portal protein | E1729_09370 | Not Available | Negative | 1908314 - 1909360 | 39275.1 |
| Helix-turn-helix domain-containing protein | E1729_09375 | Not Available | Negative | 1909360 - 1911111 | 66831.5 |
| Capsid scaffolding protein | E1729_09380 | Not Available | Positive | 1911266 - 1912102 | 30721.1 |
| Major capsid protein, p2 family | E1729_09385 | Not Available | Positive | 1912126 - 1913178 | 39306.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





